Trinity, developed at the Broad Institute and the Hebrew University of Jerusalem, represents a novel method for the efficient and robust de novo reconstruction of transcriptomes from RNA-seq data. Trinity combines three independent software modules: Inchworm, Chrysalis, and Butterfly, applied sequentially to process large volumes of RNA-seq reads. Trinity partitions the sequence data into many individual de Bruijn graphs, each representing the transcriptional complexity at at a given gene or locus, and then processes each graph independently to extract full-length splicing isoforms and to tease apart transcripts derived from paralogous genes.
This product is generally distributed as a freeware / public license. This means the software is free for anyone to download and use.
Versions of this software are available on: Linux, the Palmetto Cluster. You may have to check with the vendor about the availability of other versions.
You can obtain this title for free from the vendor.
Install Media - How to Access Trinity
Install media for this title should be obtained from the vendor's website.
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